Smoother: a unified and modular framework for incorporating structural dependency in spatial omics data.

AUTHORS: Jiayu Su, Jean-Baptiste Reynier, Xi Fu, Guojie Zhong, Jiahao Jiang, Rydberg Supo Escalante, Yiping Wang, Luis Aparicio, Benjamin Izar, David A Knowles, Raul Rabadan.

*These authors have contributed equally to this work. +Corresponding authors.

Genome Biology. 2023 December 18. doi.org/10.1186/s13059-023-03138-x

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Pervasiveness of HLA allele-specific expression loss across tumor types.

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Comprehensive characterisation of compartment-specific long non-coding RNAs associated with pancreatic ductal adenocarcinoma